Insertion junction: CLIP2.049020_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049020
Chromosome:chromosome 13
Location:2557442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801533 (1 of 2) 2.4.1.11 - Glycogen(starch) synthase / UDP-glucose--glycogen glucosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCTGGCCACAGGCGGCGTGCTGGTGTTCCCTGCAGTGGCAGGGAACA
Internal bar code:CACGTCTGTATATGAGTAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3018
LEAP-Seq percent confirming:73.8739
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCAAACCATTCACGCAC
Suggested primer 2:TTGCGGACGCTTCAACAAAG