Insertion junction: CLIP2.049024_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049024
Chromosome:chromosome 1
Location:4081738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027050 (1 of 3) PF11527 - The ARF-like 2 binding protein BART (ARL2_Bind_BART) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCATTCCCGCAAACGTCCGGATACCTGCAGATGCTGCTCCCCATCAAG
Internal bar code:CAATAAAATCAGTGCTGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATTCACGCGTAAAGCTG
Suggested primer 2:GCACACTCGTGTTGCACAAT