Insertion junction: CLIP2.049039_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049039
Chromosome:chromosome 12
Location:4784585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523300 RPN1A,OST1A,GTR22 Oligosaccharyltransferase subunit 1A, Ribophorin-1A; (1 of 1) K12666 - oligosaccharyltransferase complex subunit alpha (ribophorin I) (OST1, RPN1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACGGCACATCTTGTGTGGCCTACCCCTCAGCCTCTCGCTGTCCCTGC
Internal bar code:TTCGTTGTATAGCTAGAGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:400
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGTTGAAGCCTCTCACC
Suggested primer 2:TCCCTACGTGTCCGCTTTTC