Insertion junction: CLIP2.049055_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049055
Chromosome:chromosome 12
Location:4838982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523500 DER1 DERLIN-1 involved in ER-associated degradation system; (1 of 2) K13989 - Derlin-2/3 (DERL2_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCGGGCCCACCTCCCACCCGCCCTGTCCCACGCCTGCCGCCTCGCCG
Internal bar code:GAATTGGAGGTCCGTCTGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:868
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCGCTGTTCATCGTCAC
Suggested primer 2:GGGTGGGACAGTGAGAAGTG