Insertion junction: CLIP2.049055_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049055
Chromosome:chromosome 12
Location:4838985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523500 DER1 DERLIN-1 involved in ER-associated degradation system; (1 of 2) K13989 - Derlin-2/3 (DERL2_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGGCGGTTCGCAGGCTGGACACAGAGCTGGCGGCGGACAGCAGACG
Internal bar code:GAATTGGAGGTCCGTCTGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:716
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGGACAGTGAGAAGTG
Suggested primer 2:GCATCGCTGTTCATCGTCAC