Insertion junction: CLIP2.049060_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049060
Chromosome:chromosome 9
Location:1499709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTGGTGGCCGTGAGCGTCAGGGGTGTGTGGGACGGGTGCAGGGCAA
Internal bar code:CTTTCGTAGTCTAAAAAGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3767
LEAP-Seq percent confirming:16.3265
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:82
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGTCAACACCGGAAAC
Suggested primer 2:TCCACATCAACGGCTAACCC