Insertion junction: CLIP2.049068_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049068
Chromosome:chromosome 13
Location:2567502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580450 (1 of 1) IPR000210//IPR011333//IPR030585 - BTB/POZ domain // POZ domain // Kelch-like protein 36 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTGCATGACGCAGCTGTGAGGGTGCATAGGTTCCACCACCTTGGCGT
Internal bar code:GATGTAGCGATTACGTCTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2438
LEAP-Seq percent confirming:92.9825
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGCATCACAGAGCACGT
Suggested primer 2:AGAAAACAAACTCGCGGCAC