Insertion junction: CLIP2.049070_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049070
Chromosome:chromosome 16
Location:5242545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684350 HAR1 (1 of 2) IPR006115//IPR008927//IPR029154 - 6-phosphogluconate dehydrogenase, NADP-binding // 6-phosphogluconate dehydrogenase C-terminal domain-like // 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain; Possible 3-hydroxyacid dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGCACCCGCTTGGTGGCGCCTAGTTACCCCCCGCCCGCTGTGACTT
Internal bar code:AGGTTCGCATCTGTTTAATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5403
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACTTCGAGACAAGCACA
Suggested primer 2:ATGGCCGTACACCTGAACAG