Insertion junction: CLIP2.049071_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049071
Chromosome:chromosome 8
Location:1093508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362500 (1 of 1) IPR016024//IPR027165 - Armadillo-type fold // Condensin complex subunit 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGCACCGCGCAGGCTCTACCGCTCACCTCCAGCAGCGGCGCGGCGT
Internal bar code:GCTGCTCGTAAAAGAGGAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1308
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGCCGGTCATGTAACCT
Suggested primer 2:CTCCTCATCGTCATCCTCGC