Insertion junction: CLIP2.049076_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049076
Chromosome:chromosome 17
Location:1584164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707300 PGA3 Phospholipid/glycerol acyltransferase; (1 of 1) PTHR23063:SF1 - 1-ACYLGLYCEROPHOSPHOCHOLINE O-ACYLTRANSFERASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCCACAGCCCCAACTCCCCCTTCCGTTCACCACCCCCTTTTACCTCC
Internal bar code:CAGGATTCCACTAACGGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2324
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTACTTGAGCACCAGC
Suggested primer 2:TCAAGTGGGTGTACGTGAGC