Insertion junction: CLIP2.049077_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049077
Chromosome:chromosome 11
Location:2339531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801293 (1 of 140) IPR005135 - Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACCGGCGCGGACGCCAGCACCGGCGCGGACGCCAACACCGGCGCGGA
Internal bar code:CTTGATTTAAGAGTTGCAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4039
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGCACTGTTCGACACGA
Suggested primer 2:AAGCCAGCAAATGTCAGCAG