Insertion junction: CLIP2.049078_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049078
Chromosome:chromosome 3
Location:180233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144084 RBL7 Rhomboid-like protease; (1 of 11) 3.4.21.105 - Rhomboid protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCCGCCGCCGCCACTGGTGCCCAGCCGCCGCCGCGGCGCCCCACTA
Internal bar code:CGTGTACAAGCCCTAGCGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:391
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCACCGGCAGTGTCTTC
Suggested primer 2:CCGATGAAGGCAGTGGTCAT