Insertion junction: CLIP2.049080_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049080
Chromosome:chromosome 6
Location:1513219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260700 XUV1,UAPA6 (1 of 2) K06901 - putative MFS transporter, AGZA family, xanthine/uracil permease (pbuG); Xanthine/uracil/vitamin C permease-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGTGGGCTACCCATGGAGTGCTGAAGGTGCTAGGCATGCCCATGTGC
Internal bar code:CGGGCAGATGCCGCTTAGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4606
LEAP-Seq percent confirming:99.0741
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACGCTTCCTATCTAGT
Suggested primer 2:AGACAGGTGGGTAGCTAGCA