Insertion junction: CLIP2.049083_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049083
Chromosome:chromosome 2
Location:6144825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119800 (1 of 1) PF00097//PF00498 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // FHA domain (FHA) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTGACTGGTAGCCGCGGAAGCTGGGCGCAGCCGCATTGAAGCGGCGG
Internal bar code:ATTGCAAATCGCGAATCGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1444
LEAP-Seq percent confirming:34.7826
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGTATATGTGGCTCGCT
Suggested primer 2:AAAGCTCTGTCGTCCATGCA