Insertion junction: CLIP2.049083_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049083
Chromosome:chromosome 2
Location:6150341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119800 (1 of 1) PF00097//PF00498 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // FHA domain (FHA) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCCACATACTAGGTCTCAAGTTGGCCCAAGTTTCTAATATAATGCCT
Internal bar code:ATTGCAAATCGCGAATCGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:880
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCTCTGTCGTCCATGCA
Suggested primer 2:GCCTGTATATGTGGCTCGCT