Insertion junction: CLIP2.049096_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049096
Chromosome:chromosome 17
Location:326554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698200 MMS21 SUMO ligase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGACACACCAGGACGCACTGAGGGAGCTGGGGACCAGCTACCAGGTGC
Internal bar code:TGCCAGGGAGCGCATCCCAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:291
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCGGATACAATGAGACG
Suggested primer 2:CAACCATCAGGCGCTTATGC