Insertion junction: CLIP2.049098_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049098
Chromosome:chromosome 12
Location:4189814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517850 (1 of 18) PF12906 - RING-variant domain (RINGv) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCTCCGCCCCCGCCTCCATGACCGCCACTTCCTCGCGCCCGTGGAAAG
Internal bar code:TGGATCGAGCCTTGAGGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3030
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGGGGTGACATAGATG
Suggested primer 2:GCAGACTAGTCGATTCCGGG