Insertion junction: CLIP2.049111_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049111
Chromosome:plastome
Location:57562
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTAGGATTTTAATACTCCGAAGGAGGCAGTGGCGGTACCACTTCCAC
Internal bar code:GCAAAAGTGCGTAGCCCGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCATCCCACATCCCGTAC
Suggested primer 2:TGTGTGGTCTGGCTACGAAC