Insertion junction: CLIP2.049116_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049116
Chromosome:chromosome 6
Location:8332330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307350 (1 of 2) K12486 - stromal membrane-associated protein (SMAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCAGCCAGCTGCTCGCATCTTACCATGGCTCATTACGCGTGGCAGCG
Internal bar code:GGGTGCGGAGGGCGGTAATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:580
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACTACCTGGGCCGAAT
Suggested primer 2:GGCAAGGCTTTTTCAGTGGG