Insertion junction: CLIP2.049118_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049118
Chromosome:chromosome 13
Location:3392501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586700 FXL2 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATGCTGCAGGTCTCATTCTTTGACTACTTCGTCTTCACCGCCAACTGT
Internal bar code:TATAACGCCACTATCACAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4913
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCGTCACCACCGGTTAA
Suggested primer 2:CGCAGGGCTTGATTGTATGC