Insertion junction: CLIP2.049120_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049120
Chromosome:chromosome 9
Location:3272521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394991 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGCGCAACGCCAATTGGCCCATTCCCGCGCTTCCACACTCCCTTCC
Internal bar code:CTCAGTGACATTGCCACGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1070
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCATTGACCCAAGTACCT
Suggested primer 2:CGCGCGCAATCTTATTGACA