Insertion junction: CLIP2.049123_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049123
Chromosome:chromosome 8
Location:2090258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369400 (1 of 1) PTHR12356:SF18 - NUDC DOMAIN-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCGGCCTCCCCGCGCCTCTGCTTGCAGAGTGACCTGTTTGCGGCAG
Internal bar code:AAACGGGGAAAAAGTGCAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1647
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCTGCAGATTCTTTAGC
Suggested primer 2:TTCGCGTATTGGTTTGGGGA