Insertion junction: CLIP2.049125_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049125
Chromosome:chromosome 3
Location:2819773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161950 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCATAGTCACAACAGTGTTGCGGTGTGTGGCTGGGCGGGCCGATG
Internal bar code:GGCGGTGTGTGTTGTGGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3545
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TACACACACACCGTCTCTGC
Suggested primer 2:CAAACACGACAAAGGGCGAG