Insertion junction: CLIP2.049125_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049125
Chromosome:chromosome 3
Location:2819774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161950 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCAGCAGTGGAGAGCAGCGGTGGCTAGCTCCCAACGACCCACTTGCC
Internal bar code:TGAGCACATTGGTGCTTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4141
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACACGACAAAGGGCGAG
Suggested primer 2:TACACACACACCGTCTCTGC