Insertion junction: CLIP2.049130_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049130
Chromosome:chromosome 16
Location:2202965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658150 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGTCGCCCCTGCTGCGTGAGCGCTACTTGGGCCTGCGAGCTCCACAA
Internal bar code:TTGGTAGTGCAGTTGGTAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1073
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGATACGCCGTGGCTTATCC
Suggested primer 2:TTGCTAGTCTCTGCAGCCAC