Insertion junction: CLIP2.049134_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049134
Chromosome:chromosome 3
Location:3799820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169800 (1 of 2) PTHR10060:SF22 - CELL DEATH-RELATED NUCLEASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATGCGGTTGGGACATTGGTTTGGCTCGCTTGCTGGTCTCCGTTGTAG
Internal bar code:AAGCTTAACTTCAGGGCTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3386
LEAP-Seq percent confirming:98.9247
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACAACGTTTGTGCTCTT
Suggested primer 2:AGTGATGCCTATCTGACGCG