Insertion junction: CLIP2.049134_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049134
Chromosome:chromosome 3
Location:3799834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169800 (1 of 2) PTHR10060:SF22 - CELL DEATH-RELATED NUCLEASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACCGCATCAGGAGCGCACTCGGCCCCACCAGGGCGACCTGGTGCAG
Internal bar code:GGGTGAAATAGACCACGGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3247
LEAP-Seq percent confirming:84.466
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGATGCCTATCTGACGCG
Suggested primer 2:GCGACAACGTTTGTGCTCTT