Insertion junction: CLIP2.049141_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049141
Chromosome:chromosome 1
Location:5484149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038850 (1 of 1) PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCCGCTGCATCTGCCCGCGCCCGCTGCCTTACCCCTTCCTCACACTC
Internal bar code:GTTTTTCTGGAAAGGCAGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1018
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAAGGTCATGTGCAGCG
Suggested primer 2:TGGACTGAACGAGAAGGTGC