Insertion junction: CLIP2.049145_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049145
Chromosome:chromosome 5
Location:3168086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232000 (1 of 1) IPR001623//IPR011989 - DnaJ domain // Armadillo-like helical CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGTGGGACCACCCGCGGCGGCAGTGGGATGAGGAGGACCGCCGCGGCG
Internal bar code:GATGTAAGGATCCTTCCGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1347
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGGTGCAGTGATTCGCA
Suggested primer 2:TAGCGAGGTAGACAGCAGGT