Insertion junction: CLIP2.049149_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049149
Chromosome:chromosome 3
Location:7932323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202300 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTTCCGGACGAACAGAAAGCTGGACATGGTCACGACCTGGCACAGGA
Internal bar code:ACGACTGTAAAAGGTCGTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4269
LEAP-Seq percent confirming:79.5699
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTCGAGAACGCTGTCGA
Suggested primer 2:CAGGTATTCGCCGCCATACT