Insertion junction: CLIP2.049156_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049156
Chromosome:chromosome 11
Location:1526048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468700 CPLD65,HCAR1 7-hydroxymethyl chlorophyll a reductase; (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGGGGAGCTCCGGGTACCGTACTGTAAGGCGTCAGAAGCCT
Internal bar code:ATAAGGGAACGGGAACGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCGGGTGTGTGTATGTG
Suggested primer 2:ATGGCAAGTACACGCATGGA