Insertion junction: CLIP2.049157_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049157
Chromosome:chromosome 7
Location:915093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318950 (1 of 1) IPR000008//IPR000104//IPR003072 - C2 domain // Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCGGCGCCGGCGGCGCTGTGGGCGCAGCGGAGCTGCCGCCGCTGCGG
Internal bar code:GTACAGCGCGGTTTTGGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:963
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGTAAGCTGCAGGAACA
Suggested primer 2:TGTTTGATGCCTTGTGCTGC