Insertion junction: CLIP2.049162_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049162
Chromosome:chromosome 12
Location:9548927
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540050 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATAAGCTACCCCATCACCCCGACCCCCGTGCAACCACCGCTGCGTTC
Internal bar code:GTTATCCTAAACCAACAAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:125
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCCTGTGATAACCCCTA
Suggested primer 2:ATCCCCTGCCTTTACCTTGC