Insertion junction: CLIP2.049162_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049162
Chromosome:chromosome 12
Location:9548932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540050 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCATGAAACCATAACCCAGAAACCACAGCGTGGCGCAGGGACACCGCT
Internal bar code:GTTATCCTAAACCAACAAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:113
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCTGCCTTTACCTTGC
Suggested primer 2:TGCCCCTGTGATAACCCCTA