Insertion junction: CLIP2.049171_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049171
Chromosome:chromosome 12
Location:8871886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546200 RBL5 Rhomboid-like protein; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAATTCGCAAACATGTCAGCGTGCGGCTTCCGGTCTATGTCCTCCAGC
Internal bar code:GTCTGAAACTTTTGATCGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1327
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCGGCTCATAATGGTCT
Suggested primer 2:GTGCGTGACTCCGGTATAGG