Insertion junction: CLIP2.049175_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049175
Chromosome:chromosome 1
Location:518108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003100 (1 of 1) IPR001623//IPR011011 - DnaJ domain // Zinc finger, FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGGGCTTTCATTATATGCCCAGCAAGGCTGCCTCGCGTTATCAAGTA
Internal bar code:GAGAATACATGTATAAGCGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3196
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAGGGATTCCAACCACA
Suggested primer 2:CCACCTGTTGAGCCAGTAGG