Insertion junction: CLIP2.049182_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049182
Chromosome:chromosome 10
Location:1546943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428750 (1 of 1) K14792 - rRNA biogenesis protein RRP5 (RRP5, PDCD11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTCAGCTCACTGTGTGGTGGGTATCAGCCTAGATGCCCACATGGAGG
Internal bar code:GAGATTGTCTGATAAACGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3151
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACGGTGGAGGACTCGA
Suggested primer 2:ACACACACGCGTACATCAGT