Insertion junction: CLIP2.049183_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049183
Chromosome:chromosome 2
Location:5729863
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116550 DNJ24 (1 of 1) PF00226//PF08240 - DnaJ domain (DnaJ) // Alcohol dehydrogenase GroES-like domain (ADH_N); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCGCCCGCTCACGCACCCACCCACCCGCGAACCACAGGCCGAGCTGG
Internal bar code:CCACCCCTTCGTGAGTATAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1630
LEAP-Seq percent confirming:31.0345
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTACTGATGCACTGCACC
Suggested primer 2:ATACACACCACTTTCCGCGT