Insertion junction: CLIP2.049185_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049185
Chromosome:chromosome 10
Location:1015876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801111 (1 of 7) PF00628//PF00665 - PHD-finger (PHD) // Integrase core domain (rve) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTGTTCAGCCTCGCCGCTGATGCACCAACCCTGCCGGCATCCCAACG
Internal bar code:CATGCATGGTGGAAGCGGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1646
LEAP-Seq percent confirming:24.5283
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCACACGCACTGAGTCA
Suggested primer 2:GAGTTTGTGCCCGGTGACTA