Insertion junction: CLIP2.049185_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049185
Chromosome:chromosome 10
Location:1015885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801111 (1 of 7) PF00628//PF00665 - PHD-finger (PHD) // Integrase core domain (rve) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTCGCCGCCCTGGGCAGGGGCTGATGCAGGTGACGATGGCACTGTT
Internal bar code:GAGTTGGGTACCAAGGGTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5619
LEAP-Seq percent confirming:11.5385
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTTGTGCCCGGTGACTA
Suggested primer 2:GAGTCACACGCACTGAGTCA