Insertion junction: CLIP2.049188_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049188
Chromosome:chromosome 9
Location:3616595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801033 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGAGCCGGGCTCCGTTACTCAGAGGGCGGCGCGGCGGCGGCGGCGG
Internal bar code:TTGGGGTGTCCATTCGGAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3806
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTTCAGGCGTCTTTGGA
Suggested primer 2:GCATCATCAACGGAATGGGC