Insertion junction: CLIP2.049189_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049189
Chromosome:chromosome 10
Location:865530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423600 (1 of 1) PTHR10891//PTHR10891:SF5//PTHR22847 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED // WD40 REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGTATCTCGGCCAAGCTAGGCATTAGGGCAAACAACGCCGGCCAACG
Internal bar code:TTCCAGATGCTTTCATTTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACTGTCGCTTCGGTTT
Suggested primer 2:CACTGTGTGCGGAAACAAGG