Insertion junction: CLIP2.049189_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049189
Chromosome:chromosome 10
Location:865539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423600 (1 of 1) PTHR10891//PTHR10891:SF5//PTHR22847 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED // WD40 REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCACTCTTTCGCCGCCATGATCACCGCAATGAGCTCCGTGACCTGCGT
Internal bar code:CGTACTCCCCTCAAACCACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2926
LEAP-Seq percent confirming:82.8571
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGTGTGCGGAAACAAGG
Suggested primer 2:TGCTACTGTCGCTTCGGTTT