Insertion junction: CLIP2.049192_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049192
Chromosome:chromosome 2
Location:1138247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080850 CYN47,CYN11 Cyclophilin 47; (1 of 1) IPR003582//IPR029000 - ShKT domain // Cyclophilin-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACGCCATCGCCGCCGCCCATTGCGCCTCCTTGGCGCCCGCAGCCACC
Internal bar code:TGTGCTTTTGGTCTTTGAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1583
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGGTACTACTGGCTGTT
Suggested primer 2:GCCAAAATACAGGCGACCAC