Insertion junction: CLIP2.049192_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049192
Chromosome:chromosome 7
Location:898139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGTGGGACAGGTCACTTGGTGGGCGCGTCAGCGGTGCTGGTGTGGT
Internal bar code:TTACACCTTTGCCCTGTAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1845
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TATCAAATTGTGGCCCGCCT
Suggested primer 2:TCCCTGATTGTCGAGTTGGC