Insertion junction: CLIP2.049196_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049196
Chromosome:chromosome 3
Location:6700266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195700 (1 of 1) PTHR22957//PTHR22957:SF288//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACGTGTCTTCACTCACCCGCCCACCACAACGAAGCACCACAACGCCA
Internal bar code:ACCGTTCGGTTGGAAATATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:432
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGAAGGATTGACCGGCA
Suggested primer 2:TAGGCAAGGGCTGTTTACCG