Insertion junction: CLIP2.049203_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049203
Chromosome:chromosome 3
Location:4000541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171650 HEL16 (1 of 2) PTHR18934:SF145 - ATP-DEPENDENT RNA HELICASE DHX57-RELATED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCACCCCGCCACACCGCCACCCCACCCCACCCCACCCCACCCCAACT
Internal bar code:GTGCATTGACGAAAGTCTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAGCTCTCCCAATCCGA
Suggested primer 2:ACCACTACCATCCACTTGCG