Insertion junction: CLIP2.049203_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049203
Chromosome:chromosome 3
Location:4000554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171650 HEL16 (1 of 2) PTHR18934:SF145 - ATP-DEPENDENT RNA HELICASE DHX57-RELATED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGGGTGGATGGGTTGGCACCCGCGTGCGTGTGTCAATGTGCCACCCA
Internal bar code:GAAGCTAGTTGTGAACGTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACTACCATCCACTTGCG
Suggested primer 2:TACCAGCTCTCCCAATCCGA