Insertion junction: CLIP2.049204_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049204
Chromosome:chromosome 9
Location:881436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403450 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGGCCGTGCTGCTTTCCTTCCAGCGGCCAGGCCGGCAGCGGCAGCAT
Internal bar code:CGTCACGACAATAGGTATCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3432
LEAP-Seq percent confirming:58.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGCTCATAAAGTTGCCG
Suggested primer 2:CTGCAGGTAGAAAGGTGGGG