Insertion junction: CLIP2.049206_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049206
Chromosome:chromosome 3
Location:5020228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179860 (1 of 1) 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase; tRNA-(m5C) methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCACGCCACCACATGCAACCATCGAGCTGCTAGGAGCAGTGAAGTGC
Internal bar code:ACTTAATGTTTGCAACATTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:512
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTGTCAGAAGTCCAGAC
Suggested primer 2:CACATAAAGACGGCCATGCG